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CodonCode Aligner 3.7.1.1

A program for sequence assembly, contig editing, and mutation detection.

License / Price:
Demo / $960.00
Last Updated:
2010-11-04
Operating System:
Mac OS X
Publisher:
CodonCode Corporation

Description of CodonCode Aligner 3.7.1.1

Brothersoft Editor: CodonCode Aligner is a program for sequence assembly, contig editing, and mutation detection, available for Windows and Mac OS X. Aligner is compatible with Phred-Phrap and fully supports sequence quality scores, while offering a familiar, easy-to-learn user interface.

With CodonCode Aligner, you can:
- Import sequences from text files
- Import sequences from ABI and SCF files
- End clip
- Vector trim
- Assemble contigs
- Align to a reference sequence
- Align contigs to each other while keeping the links to the traces
- Assemble or align in groups, based on sample names
- Find heterozygous mutations
- Analyze heterozygous insertions and deletions
- Define regions of interest ("features"), for example low quality consensus regions
- Quickly navigate between user-defined features
- Import and edit Phrap-generated assemblies
- Run Phred and Phrap directly from Aligner projects
- Export sequences and features
- Export Consed-compatible assembly projects

Requirements: Mac OS X 10.5 or higher
Platform: PowerPC / Intel

Download CodonCode Aligner 3.7.1.1

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